Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 RARRES2P4-201ENST00000514074 484 ntBASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2LQ9NUG4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 NOC2LP1-202ENST00000452600 2235 ntBASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 NOC2LP2-201ENST00000407594 1944 ntBASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2LQ9NUG4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 GCSHP5-201ENST00000443090 522 ntBASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 AL158047.1-201ENST00000445918 881 ntBASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCM2LQ9NUG4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 AL596275.1-201ENST00000423464 877 ntBASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 AC013268.1-206ENST00000638368 961 ntBASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 AC112229.1-201ENST00000639295 961 ntBASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms