Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPHK2Q9NRA0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPHK2Q9NRA0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 AC063952.2-201ENST00000498792 1227 ntBASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SPHK2Q9NRA0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 COX11P1-201ENST00000489116 835 ntBASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 YBX1P2-201ENST00000489612 999 ntBASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 AC022616.7-201ENST00000525383 220 ntBASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 LINC01238-205ENST00000567549 1107 ntBASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 AC087388.1-201ENST00000571370 1112 ntBASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK2Q9NRA0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 RNF152P1-201ENST00000397754 604 ntBASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SPHK2Q9NRA0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.65■□□□□ 0.74
SPHK2Q9NRA0 SDHAP1-207ENST00000440850 2000 ntBASIC19.64■□□□□ 0.74
SPHK2Q9NRA0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SPHK2Q9NRA0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPHK2Q9NRA0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.64■□□□□ 0.74
SPHK2Q9NRA0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPHK2Q9NRA0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPHK2Q9NRA0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.64■□□□□ 0.73
SPHK2Q9NRA0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPHK2Q9NRA0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.64■□□□□ 0.73
SPHK2Q9NRA0 TSPY5P-201ENST00000426936 936 ntBASIC19.64■□□□□ 0.73
SPHK2Q9NRA0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.64■□□□□ 0.73
SPHK2Q9NRA0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPHK2Q9NRA0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPHK2Q9NRA0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms