Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF3Q9NR23 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF3Q9NR23 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF3Q9NR23 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF3Q9NR23 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF3Q9NR23 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.31■□□□□ 0.84
GDF3Q9NR23 AC005332.8-201ENST00000622750 2735 ntBASIC20.31■□□□□ 0.84
GDF3Q9NR23 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF3Q9NR23 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GDF3Q9NR23 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF3Q9NR23 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.31■□□□□ 0.84
GDF3Q9NR23 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.31■□□□□ 0.84
GDF3Q9NR23 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.31■□□□□ 0.84
GDF3Q9NR23 FAM197Y4-202ENST00000622692 608 ntBASIC20.31■□□□□ 0.84
GDF3Q9NR23 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
GDF3Q9NR23 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF3Q9NR23 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.31■□□□□ 0.84
GDF3Q9NR23 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
GDF3Q9NR23 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.31■□□□□ 0.84
GDF3Q9NR23 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF3Q9NR23 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.31■□□□□ 0.84
GDF3Q9NR23 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 AC105020.6-201ENST00000621523 1217 ntBASIC20.3■□□□□ 0.84
GDF3Q9NR23 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF3Q9NR23 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.3■□□□□ 0.84
GDF3Q9NR23 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 C1QBPP2-201ENST00000528754 825 ntBASIC20.29■□□□□ 0.84
GDF3Q9NR23 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 SOX15-203ENST00000570788 1093 ntBASIC20.29■□□□□ 0.84
GDF3Q9NR23 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GDF3Q9NR23 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF3Q9NR23 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.28■□□□□ 0.84
GDF3Q9NR23 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.28■□□□□ 0.84
GDF3Q9NR23 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GDF3Q9NR23 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.28■□□□□ 0.84
GDF3Q9NR23 AC141586.3-201ENST00000562166 1838 ntBASIC20.28■□□□□ 0.84
GDF3Q9NR23 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF3Q9NR23 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
GDF3Q9NR23 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF3Q9NR23 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF3Q9NR23 MIR718-201ENST00000390190 70 ntBASIC20.28■□□□□ 0.84
GDF3Q9NR23 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.28■□□□□ 0.84
GDF3Q9NR23 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF3Q9NR23 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GDF3Q9NR23 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.28■□□□□ 0.84
GDF3Q9NR23 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GDF3Q9NR23 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms