Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 AC008687.6-201ENST00000596318 630 ntBASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 AC133041.1-202ENST00000642053 222 ntBASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 CROCCP3-202ENST00000420820 1947 ntBASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LRTM1Q9HBL6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
LRTM1Q9HBL6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRTM1Q9HBL6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 AC006333.2-201ENST00000607957 2099 ntBASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 AC069152.1-201ENST00000438030 544 ntBASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 AL138781.2-201ENST00000617896 1843 ntBASIC18.51■□□□□ 0.55
LRTM1Q9HBL6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM1Q9HBL6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms