Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SP110Q9HB58 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SP110Q9HB58 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SP110Q9HB58 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SP110Q9HB58 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SP110Q9HB58 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.74■□□□□ 0.75
SP110Q9HB58 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.74■□□□□ 0.75
SP110Q9HB58 AC233702.5-201ENST00000584107 538 ntBASIC19.74■□□□□ 0.75
SP110Q9HB58 AP001412.1-201ENST00000608405 714 ntBASIC19.74■□□□□ 0.75
SP110Q9HB58 AC131212.4-201ENST00000623606 975 ntBASIC19.74■□□□□ 0.75
SP110Q9HB58 CR392000.1-201ENST00000624770 1228 ntBASIC19.74■□□□□ 0.75
SP110Q9HB58 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SP110Q9HB58 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.74■□□□□ 0.75
SP110Q9HB58 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SP110Q9HB58 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SP110Q9HB58 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SP110Q9HB58 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SP110Q9HB58 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.73■□□□□ 0.75
SP110Q9HB58 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.73■□□□□ 0.75
SP110Q9HB58 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SP110Q9HB58 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SP110Q9HB58 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.73■□□□□ 0.75
SP110Q9HB58 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SP110Q9HB58 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.73■□□□□ 0.75
SP110Q9HB58 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SP110Q9HB58 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SP110Q9HB58 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SP110Q9HB58 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.73■□□□□ 0.75
SP110Q9HB58 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.73■□□□□ 0.75
SP110Q9HB58 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.73■□□□□ 0.75
SP110Q9HB58 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SP110Q9HB58 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SP110Q9HB58 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.73■□□□□ 0.75
SP110Q9HB58 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SP110Q9HB58 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SP110Q9HB58 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SP110Q9HB58 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.73■□□□□ 0.75
SP110Q9HB58 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP110Q9HB58 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP110Q9HB58 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.72■□□□□ 0.75
SP110Q9HB58 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
SP110Q9HB58 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SP110Q9HB58 AC116562.4-201ENST00000641316 2276 ntBASIC19.72■□□□□ 0.75
SP110Q9HB58 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP110Q9HB58 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP110Q9HB58 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP110Q9HB58 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP110Q9HB58 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP110Q9HB58 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.72■□□□□ 0.75
SP110Q9HB58 FAM197Y1-201ENST00000421178 764 ntBASIC19.72■□□□□ 0.75
SP110Q9HB58 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.72■□□□□ 0.75
SP110Q9HB58 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.72■□□□□ 0.75
SP110Q9HB58 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.72■□□□□ 0.75
SP110Q9HB58 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.72■□□□□ 0.75
SP110Q9HB58 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.72■□□□□ 0.75
SP110Q9HB58 Z99916.2-201ENST00000604037 246 ntBASIC19.72■□□□□ 0.75
SP110Q9HB58 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.72■□□□□ 0.75
SP110Q9HB58 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.72■□□□□ 0.75
SP110Q9HB58 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP110Q9HB58 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP110Q9HB58 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.72■□□□□ 0.75
SP110Q9HB58 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SP110Q9HB58 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SP110Q9HB58 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SP110Q9HB58 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.72■□□□□ 0.75
SP110Q9HB58 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SP110Q9HB58 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP110Q9HB58 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SP110Q9HB58 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 SDHAP1-207ENST00000440850 2000 ntBASIC19.71■□□□□ 0.75
SP110Q9HB58 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SP110Q9HB58 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.71■□□□□ 0.75
SP110Q9HB58 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.71■□□□□ 0.75
SP110Q9HB58 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.71■□□□□ 0.75
SP110Q9HB58 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.71■□□□□ 0.75
SP110Q9HB58 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SP110Q9HB58 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 CD177P1-201ENST00000606252 935 ntBASIC19.71■□□□□ 0.75
SP110Q9HB58 AL049637.2-201ENST00000641778 930 ntBASIC19.71■□□□□ 0.75
SP110Q9HB58 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
SP110Q9HB58 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SP110Q9HB58 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SP110Q9HB58 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.71■□□□□ 0.75
SP110Q9HB58 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SP110Q9HB58 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SP110Q9HB58 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms