Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 AC233263.1-201ENST00000578059 224 ntBASIC18.43■□□□□ 0.54
BRF2Q9HAW0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 AC239809.2-201ENST00000415381 517 ntBASIC18.42■□□□□ 0.54
BRF2Q9HAW0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 KRT16P5-201ENST00000455284 522 ntBASIC18.42■□□□□ 0.54
BRF2Q9HAW0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 AL160286.2-201ENST00000567150 934 ntBASIC18.42■□□□□ 0.54
BRF2Q9HAW0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 HLA-A-209ENST00000638375 975 ntBASIC18.42■□□□□ 0.54
BRF2Q9HAW0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BRF2Q9HAW0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 AL023875.1-201ENST00000640777 796 ntBASIC18.41■□□□□ 0.54
BRF2Q9HAW0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 IRX1P1-201ENST00000438849 1838 ntBASIC18.41■□□□□ 0.54
BRF2Q9HAW0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRF2Q9HAW0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 AL049812.1-201ENST00000432563 2267 ntBASIC18.4■□□□□ 0.54
BRF2Q9HAW0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 AC133681.1-201ENST00000465482 601 ntBASIC18.4■□□□□ 0.54
BRF2Q9HAW0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 FEM1AP3-201ENST00000403722 1741 ntBASIC18.4■□□□□ 0.54
BRF2Q9HAW0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRF2Q9HAW0 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms