Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.33■□□□□ 0.2
GSX1Q9H4S2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GSX1Q9H4S2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 HOMER2P1-201ENST00000455653 964 ntBASIC16.32■□□□□ 0.2
GSX1Q9H4S2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 AL445675.2-201ENST00000620291 557 ntBASIC16.32■□□□□ 0.2
GSX1Q9H4S2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GSX1Q9H4S2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.31■□□□□ 0.2
GSX1Q9H4S2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 VENTXP5-201ENST00000523979 775 ntBASIC16.31■□□□□ 0.2
GSX1Q9H4S2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSX1Q9H4S2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GSX1Q9H4S2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSX1Q9H4S2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.3■□□□□ 0.2
GSX1Q9H4S2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms