Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 AC105036.2-201ENST00000569468 176 ntBASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 AL050303.2-201ENST00000619798 666 ntBASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 AC092437.1-201ENST00000624794 1048 ntBASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 AC083906.6-201ENST00000641366 219 ntBASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHACTR1Q9C0D0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHACTR1Q9C0D0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
PHACTR1Q9C0D0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PHACTR1Q9C0D0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PHACTR1Q9C0D0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 AC092118.2-201ENST00000613495 667 ntBASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.51■□□□□ 0.71
PHACTR1Q9C0D0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 BICD1-207ENST00000551848 1962 ntBASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 AC073111.5-205ENST00000641717 521 ntBASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 AC124283.5-201ENST00000624661 1809 ntBASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHACTR1Q9C0D0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms