Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 AL008721.1-201ENST00000609964 604 ntBASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.58■□□□□ 0.73
COL25A1Q9BXS0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL25A1Q9BXS0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL25A1Q9BXS0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL25A1Q9BXS0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.58■□□□□ 0.73
COL25A1Q9BXS0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL25A1Q9BXS0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 Z83851.2-201ENST00000609564 659 ntBASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.58■□□□□ 0.72
COL25A1Q9BXS0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 AL591684.3-201ENST00000605187 298 ntBASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL25A1Q9BXS0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 AC023274.1-201ENST00000418278 595 ntBASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 RNA5SP416-201ENST00000516838 111 ntBASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 AC005332.3-201ENST00000589904 676 ntBASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 AL157888.1-201ENST00000631930 593 ntBASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL25A1Q9BXS0 AC011484.1-201ENST00000377652 1995 ntBASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 AP005901.3-202ENST00000581653 237 ntBASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.55■□□□□ 0.72
COL25A1Q9BXS0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 AC254562.1-201ENST00000417586 456 ntBASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 AC015922.1-201ENST00000421102 1152 ntBASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.54■□□□□ 0.72
COL25A1Q9BXS0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms