Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEMA3CQ99985 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEMA3CQ99985 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEMA3CQ99985 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SEMA3CQ99985 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.55■□□□□ 0.72
SEMA3CQ99985 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SEMA3CQ99985 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.55■□□□□ 0.72
SEMA3CQ99985 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.55■□□□□ 0.72
SEMA3CQ99985 FAM197Y1-201ENST00000421178 764 ntBASIC19.55■□□□□ 0.72
SEMA3CQ99985 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 AC004980.1-204ENST00000429707 299 ntBASIC19.55■□□□□ 0.72
SEMA3CQ99985 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.55■□□□□ 0.72
SEMA3CQ99985 AC131212.4-201ENST00000623606 975 ntBASIC19.55■□□□□ 0.72
SEMA3CQ99985 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SEMA3CQ99985 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.55■□□□□ 0.72
SEMA3CQ99985 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA3CQ99985 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3CQ99985 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3CQ99985 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3CQ99985 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3CQ99985 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3CQ99985 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3CQ99985 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.54■□□□□ 0.72
SEMA3CQ99985 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 CD177P1-201ENST00000606252 935 ntBASIC19.54■□□□□ 0.72
SEMA3CQ99985 AP001412.1-201ENST00000608405 714 ntBASIC19.54■□□□□ 0.72
SEMA3CQ99985 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 AC113410.3-201ENST00000623366 203 ntBASIC19.54■□□□□ 0.72
SEMA3CQ99985 AC073912.3-201ENST00000624414 853 ntBASIC19.54■□□□□ 0.72
SEMA3CQ99985 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 AL049637.2-201ENST00000641778 930 ntBASIC19.54■□□□□ 0.72
SEMA3CQ99985 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3CQ99985 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3CQ99985 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3CQ99985 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SEMA3CQ99985 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3CQ99985 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 FAM210CP-201ENST00000445714 574 ntBASIC19.53■□□□□ 0.72
SEMA3CQ99985 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.53■□□□□ 0.72
SEMA3CQ99985 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3CQ99985 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SEMA3CQ99985 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEMA3CQ99985 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEMA3CQ99985 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SEMA3CQ99985 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SEMA3CQ99985 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEMA3CQ99985 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SEMA3CQ99985 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEMA3CQ99985 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms