Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.82■□□□□ 0.6
NPAS2Q99743 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.82■□□□□ 0.6
NPAS2Q99743 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 AC092368.3-202ENST00000574180 1591 ntBASIC18.82■□□□□ 0.6
NPAS2Q99743 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.82■□□□□ 0.6
NPAS2Q99743 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.82■□□□□ 0.6
NPAS2Q99743 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NPAS2Q99743 AC128676.1-201ENST00000454392 318 ntBASIC18.82■□□□□ 0.6
NPAS2Q99743 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.82■□□□□ 0.6
NPAS2Q99743 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NPAS2Q99743 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NPAS2Q99743 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NPAS2Q99743 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 AL161938.1-201ENST00000569833 2180 ntBASIC18.82■□□□□ 0.6
NPAS2Q99743 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NPAS2Q99743 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NPAS2Q99743 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.81■□□□□ 0.6
NPAS2Q99743 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.81■□□□□ 0.6
NPAS2Q99743 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.81■□□□□ 0.6
NPAS2Q99743 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NPAS2Q99743 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.81■□□□□ 0.6
NPAS2Q99743 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.81■□□□□ 0.6
NPAS2Q99743 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.81■□□□□ 0.6
NPAS2Q99743 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.81■□□□□ 0.6
NPAS2Q99743 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.81■□□□□ 0.6
NPAS2Q99743 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
NPAS2Q99743 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NPAS2Q99743 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.81■□□□□ 0.6
NPAS2Q99743 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS2Q99743 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.81■□□□□ 0.6
NPAS2Q99743 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS2Q99743 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS2Q99743 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS2Q99743 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS2Q99743 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS2Q99743 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.8■□□□□ 0.6
NPAS2Q99743 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS2Q99743 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NPAS2Q99743 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS2Q99743 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
NPAS2Q99743 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.8■□□□□ 0.6
NPAS2Q99743 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.8■□□□□ 0.6
NPAS2Q99743 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.8■□□□□ 0.6
NPAS2Q99743 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.8■□□□□ 0.6
NPAS2Q99743 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.8■□□□□ 0.6
NPAS2Q99743 AC073648.6-201ENST00000641589 218 ntBASIC18.8■□□□□ 0.6
NPAS2Q99743 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NPAS2Q99743 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS2Q99743 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.8■□□□□ 0.6
NPAS2Q99743 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.8■□□□□ 0.6
NPAS2Q99743 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.8■□□□□ 0.6
NPAS2Q99743 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
NPAS2Q99743 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS2Q99743 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NPAS2Q99743 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NPAS2Q99743 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NPAS2Q99743 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NPAS2Q99743 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NPAS2Q99743 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
NPAS2Q99743 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.79■□□□□ 0.6
NPAS2Q99743 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms