Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 AL158211.5-201ENST00000623583 2518 ntBASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 AL359736.2-201ENST00000621992 437 ntBASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 AC110285.5-201ENST00000611501 352 ntBASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUDCD1Q96RS6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 GCSHP5-201ENST00000443090 522 ntBASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 AC142381.4-202ENST00000563973 229 ntBASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NUDCD1Q96RS6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NUDCD1Q96RS6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 KRT18P16-201ENST00000510337 1294 ntBASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms