Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 TPM4P1-201ENST00000436100 807 ntBASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 AC140113.3-201ENST00000605663 199 ntBASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.44■□□□□ 0.54
SLC46A1Q96NT5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 TMEM179-206ENST00000616017 1645 ntBASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 CA15P1-201ENST00000481698 905 ntBASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC46A1Q96NT5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 AL691432.2-201ENST00000607222 2038 ntBASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 TCF3P1-201ENST00000423021 1937 ntBASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC46A1Q96NT5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.41■□□□□ 0.54
SLC46A1Q96NT5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC46A1Q96NT5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SLC46A1Q96NT5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC46A1Q96NT5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC46A1Q96NT5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC46A1Q96NT5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC46A1Q96NT5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC46A1Q96NT5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC46A1Q96NT5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms