Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 AC004951.3-201ENST00000418645 1148 ntBASIC15.68■□□□□ 0.1
ZNF48Q96MX3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.67■□□□□ 0.1
ZNF48Q96MX3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 MFAP1P1-201ENST00000442257 1255 ntBASIC15.67■□□□□ 0.1
ZNF48Q96MX3 AC128688.1-201ENST00000487626 519 ntBASIC15.67■□□□□ 0.1
ZNF48Q96MX3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 WWOX-216ENST00000569818 525 ntBASIC15.67■□□□□ 0.1
ZNF48Q96MX3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF48Q96MX3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.66■□□□□ 0.1
ZNF48Q96MX3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 FAM207BP-201ENST00000447172 505 ntBASIC15.66■□□□□ 0.1
ZNF48Q96MX3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF48Q96MX3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 AC091390.4-202ENST00000476426 537 ntBASIC15.65■□□□□ 0.1
ZNF48Q96MX3 Z85996.1-201ENST00000494644 937 ntBASIC15.65■□□□□ 0.1
ZNF48Q96MX3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms