Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 LINC01023-201ENST00000606054 436 ntBASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 AC133561.5-201ENST00000635547 218 ntBASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCD1Q96GM5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 NAPSB-206ENST00000562112 1266 ntBASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
SMARCD1Q96GM5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 PRSS44-201ENST00000515154 1146 ntBASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 C2orf69P3-201ENST00000565542 1120 ntBASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCD1Q96GM5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.27■□□□□ 0.83
SMARCD1Q96GM5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SMARCD1Q96GM5 KRT8P11-201ENST00000409686 1436 ntBASIC20.27■□□□□ 0.83
SMARCD1Q96GM5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 CYP2D8P-201ENST00000433633 1490 ntBASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 ECEL1P3-201ENST00000427961 737 ntBASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 AC097493.4-201ENST00000641197 219 ntBASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCD1Q96GM5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 Z82202.1-201ENST00000623446 1880 ntBASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms