Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARRDC3Q96B67 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ARRDC3Q96B67 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARRDC3Q96B67 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARRDC3Q96B67 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.25■□□□□ 0.67
ARRDC3Q96B67 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.25■□□□□ 0.67
ARRDC3Q96B67 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 PRSS44-201ENST00000515154 1146 ntBASIC19.24■□□□□ 0.67
ARRDC3Q96B67 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARRDC3Q96B67 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 HMGA1P5-201ENST00000412453 271 ntBASIC19.23■□□□□ 0.67
ARRDC3Q96B67 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 LIN28AP1-201ENST00000429574 405 ntBASIC19.23■□□□□ 0.67
ARRDC3Q96B67 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARRDC3Q96B67 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 TSPY23P-201ENST00000440136 739 ntBASIC19.22■□□□□ 0.67
ARRDC3Q96B67 ATP5G1P1-201ENST00000448724 379 ntBASIC19.22■□□□□ 0.67
ARRDC3Q96B67 AC104076.2-201ENST00000448912 469 ntBASIC19.22■□□□□ 0.67
ARRDC3Q96B67 TSPY17P-201ENST00000450329 467 ntBASIC19.22■□□□□ 0.67
ARRDC3Q96B67 CA15P1-201ENST00000481698 905 ntBASIC19.22■□□□□ 0.67
ARRDC3Q96B67 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 AL353719.1-201ENST00000566847 864 ntBASIC19.22■□□□□ 0.67
ARRDC3Q96B67 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 AC010653.2-201ENST00000623505 997 ntBASIC19.22■□□□□ 0.67
ARRDC3Q96B67 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.22■□□□□ 0.67
ARRDC3Q96B67 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.22■□□□□ 0.67
ARRDC3Q96B67 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.21■□□□□ 0.67
ARRDC3Q96B67 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARRDC3Q96B67 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.21■□□□□ 0.67
ARRDC3Q96B67 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.21■□□□□ 0.67
ARRDC3Q96B67 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ARRDC3Q96B67 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.21■□□□□ 0.67
ARRDC3Q96B67 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
ARRDC3Q96B67 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARRDC3Q96B67 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms