Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CPNE4Q96A23 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CPNE4Q96A23 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CPNE4Q96A23 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE4Q96A23 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE4Q96A23 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.31■□□□□ 0.36
CPNE4Q96A23 FSCN1P1-201ENST00000568912 1481 ntBASIC17.31■□□□□ 0.36
CPNE4Q96A23 AC125437.2-201ENST00000625180 2167 ntBASIC17.3■□□□□ 0.36
CPNE4Q96A23 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE4Q96A23 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE4Q96A23 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE4Q96A23 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE4Q96A23 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE4Q96A23 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 AP003071.4-201ENST00000562276 1284 ntBASIC17.3■□□□□ 0.36
CPNE4Q96A23 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE4Q96A23 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CPNE4Q96A23 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE4Q96A23 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE4Q96A23 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE4Q96A23 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE4Q96A23 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE4Q96A23 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE4Q96A23 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE4Q96A23 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE4Q96A23 AC116562.2-201ENST00000507042 360 ntBASIC17.29■□□□□ 0.36
CPNE4Q96A23 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.29■□□□□ 0.36
CPNE4Q96A23 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE4Q96A23 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE4Q96A23 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE4Q96A23 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE4Q96A23 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE4Q96A23 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE4Q96A23 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE4Q96A23 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.28■□□□□ 0.36
CPNE4Q96A23 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CPNE4Q96A23 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE4Q96A23 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE4Q96A23 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.27■□□□□ 0.36
CPNE4Q96A23 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE4Q96A23 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
CPNE4Q96A23 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.27■□□□□ 0.36
CPNE4Q96A23 REXO1L10P-201ENST00000615707 1290 ntBASIC17.27■□□□□ 0.36
CPNE4Q96A23 MIR6786-201ENST00000616843 113 ntBASIC17.27■□□□□ 0.36
CPNE4Q96A23 REXO1L12P-201ENST00000622156 912 ntBASIC17.27■□□□□ 0.36
CPNE4Q96A23 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.27■□□□□ 0.36
CPNE4Q96A23 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE4Q96A23 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.27■□□□□ 0.35
CPNE4Q96A23 AC104417.2-201ENST00000562989 1793 ntBASIC17.27■□□□□ 0.35
CPNE4Q96A23 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms