Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF4Q8WZA2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF4Q8WZA2 TBC1D3P2-202ENST00000577902 1649 ntBASIC25.27■■□□□ 1.64
RAPGEF4Q8WZA2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF4Q8WZA2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF4Q8WZA2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
RAPGEF4Q8WZA2 LINC01311-201ENST00000565162 1445 ntBASIC25.27■■□□□ 1.64
RAPGEF4Q8WZA2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAPGEF4Q8WZA2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
RAPGEF4Q8WZA2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
RAPGEF4Q8WZA2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 SPDYE15P-201ENST00000424157 909 ntBASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 AC104417.2-201ENST00000562989 1793 ntBASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
RAPGEF4Q8WZA2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
RAPGEF4Q8WZA2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 CLEC4GP1-201ENST00000596555 870 ntBASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 CR769767.2-201ENST00000622735 460 ntBASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC25.23■■□□□ 1.63
RAPGEF4Q8WZA2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC25.22■■□□□ 1.63
RAPGEF4Q8WZA2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
RAPGEF4Q8WZA2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms