Protein–RNA interactions for Protein: Q8WWF5

ZNRF4, E3 ubiquitin-protein ligase ZNRF4, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF4Q8WWF5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNRF4Q8WWF5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 AL121906.2-201ENST00000621597 723 ntBASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 IRX1P1-201ENST00000438849 1838 ntBASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.16■□□□□ 0.34
ZNRF4Q8WWF5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 KRT18P16-201ENST00000510337 1294 ntBASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 SOX15-203ENST00000570788 1093 ntBASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 AC009113.1-201ENST00000570267 2443 ntBASIC17.15■□□□□ 0.34
ZNRF4Q8WWF5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ZNRF4Q8WWF5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.14■□□□□ 0.34
ZNRF4Q8WWF5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
ZNRF4Q8WWF5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNRF4Q8WWF5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNRF4Q8WWF5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNRF4Q8WWF5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNRF4Q8WWF5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNRF4Q8WWF5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNRF4Q8WWF5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNRF4Q8WWF5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNRF4Q8WWF5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms