Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RNF138Q8WVD3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF138Q8WVD3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF138Q8WVD3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF138Q8WVD3 MFAP1P1-201ENST00000442257 1255 ntBASIC17.46■□□□□ 0.39
RNF138Q8WVD3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF138Q8WVD3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF138Q8WVD3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF138Q8WVD3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF138Q8WVD3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNF138Q8WVD3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF138Q8WVD3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF138Q8WVD3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF138Q8WVD3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.46■□□□□ 0.38
RNF138Q8WVD3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 AC007952.6-201ENST00000573168 2673 ntBASIC17.45■□□□□ 0.38
RNF138Q8WVD3 AC003957.1-201ENST00000625108 2673 ntBASIC17.45■□□□□ 0.38
RNF138Q8WVD3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF138Q8WVD3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 FEM1AP3-201ENST00000403722 1741 ntBASIC17.44■□□□□ 0.38
RNF138Q8WVD3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 CA15P1-201ENST00000481698 905 ntBASIC17.44■□□□□ 0.38
RNF138Q8WVD3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF138Q8WVD3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 IRX1P1-201ENST00000438849 1838 ntBASIC17.43■□□□□ 0.38
RNF138Q8WVD3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 SLC25A1P4-201ENST00000567977 778 ntBASIC17.43■□□□□ 0.38
RNF138Q8WVD3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 KRT8P9-201ENST00000558927 1449 ntBASIC17.43■□□□□ 0.38
RNF138Q8WVD3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF138Q8WVD3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF138Q8WVD3 FP475955.4-201ENST00000623131 1990 ntBASIC17.42■□□□□ 0.38
RNF138Q8WVD3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF138Q8WVD3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF138Q8WVD3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
RNF138Q8WVD3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF138Q8WVD3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF138Q8WVD3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF138Q8WVD3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF138Q8WVD3 MMP23A-201ENST00000234610 1017 ntBASIC17.42■□□□□ 0.38
RNF138Q8WVD3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms