Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 KRT8P17-201ENST00000453110 1448 ntBASIC16.66■□□□□ 0.26
CCDC107Q8WV48 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 AC005332.8-201ENST00000622750 2735 ntBASIC16.66■□□□□ 0.26
CCDC107Q8WV48 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC107Q8WV48 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 PTBP1P-201ENST00000554374 1601 ntBASIC16.65■□□□□ 0.26
CCDC107Q8WV48 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC107Q8WV48 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.64■□□□□ 0.26
CCDC107Q8WV48 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC107Q8WV48 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 AC010980.2-201ENST00000587099 1412 ntBASIC16.63■□□□□ 0.25
CCDC107Q8WV48 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
CCDC107Q8WV48 AC093787.1-201ENST00000450396 207 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms