Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SMARCC2Q8TAQ2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.58■■□□□ 1.2
SMARCC2Q8TAQ2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SMARCC2Q8TAQ2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SMARCC2Q8TAQ2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 AC012618.2-201ENST00000428058 849 ntBASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 HTR7P1-201ENST00000538670 1336 ntBASIC22.57■■□□□ 1.2
SMARCC2Q8TAQ2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 AL161938.1-201ENST00000569833 2180 ntBASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 AL596275.1-201ENST00000423464 877 ntBASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 AC233702.5-201ENST00000584107 538 ntBASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 AL020996.1-203ENST00000536896 2307 ntBASIC22.56■■□□□ 1.2
SMARCC2Q8TAQ2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.55■■□□□ 1.2
SMARCC2Q8TAQ2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 TUBB8P6-201ENST00000436895 1288 ntBASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 AP001412.1-201ENST00000608405 714 ntBASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMARCC2Q8TAQ2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms