Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 BX276092.2-201ENST00000417668 665 ntBASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 AC133552.2-202ENST00000575694 574 ntBASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
BBS1Q8NFJ9 MKRN4P-201ENST00000444706 1521 ntBASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 AL390719.1-204ENST00000412397 1219 ntBASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 AC005829.2-201ENST00000571422 1056 ntBASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 AL050303.2-201ENST00000619798 666 ntBASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BBS1Q8NFJ9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 AC105036.2-201ENST00000569468 176 ntBASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 AIRN-201ENST00000601203 4374 ntBASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.3■□□□□ 0.36
BBS1Q8NFJ9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 AC018470.1-201ENST00000624790 3129 ntBASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 AC006557.6-201ENST00000623071 864 ntBASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms