Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 AC116407.4-201ENST00000623319 1061 ntBASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 AC005332.1-201ENST00000577698 1310 ntBASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 AL157384.1-201ENST00000445995 2473 ntBASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF248Q8NDW4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 AC008040.2-201ENST00000461049 708 ntBASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 AL359075.1-203ENST00000462729 1002 ntBASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 LINC01006-201ENST00000333319 2292 ntBASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF248Q8NDW4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.39■□□□□ 0.54
ZNF248Q8NDW4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.39■□□□□ 0.54
ZNF248Q8NDW4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZNF248Q8NDW4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.39■□□□□ 0.54
ZNF248Q8NDW4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZNF248Q8NDW4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 GABARAPL3-202ENST00000624044 1851 ntBASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF248Q8NDW4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms