Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CFAP43Q8NDM7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CFAP43Q8NDM7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC30.21■■■□□ 2.43
CFAP43Q8NDM7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CFAP43Q8NDM7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC30.21■■■□□ 2.43
CFAP43Q8NDM7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CFAP43Q8NDM7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CFAP43Q8NDM7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC30.21■■■□□ 2.43
CFAP43Q8NDM7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC30.21■■■□□ 2.43
CFAP43Q8NDM7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CFAP43Q8NDM7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC30.2■■■□□ 2.43
CFAP43Q8NDM7 PRELID1P1-202ENST00000567272 903 ntBASIC30.2■■■□□ 2.43
CFAP43Q8NDM7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CFAP43Q8NDM7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
CFAP43Q8NDM7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CFAP43Q8NDM7 AL391422.3-201ENST00000603791 2761 ntBASIC30.2■■■□□ 2.43
CFAP43Q8NDM7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC30.2■■■□□ 2.43
CFAP43Q8NDM7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
CFAP43Q8NDM7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
CFAP43Q8NDM7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 AL157384.1-201ENST00000445995 2473 ntBASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 AP000523.1-201ENST00000398242 1049 ntBASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 NEK4P2-201ENST00000580004 1012 ntBASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
CFAP43Q8NDM7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
CFAP43Q8NDM7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CFAP43Q8NDM7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
CFAP43Q8NDM7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CFAP43Q8NDM7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CFAP43Q8NDM7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CFAP43Q8NDM7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC30.19■■■□□ 2.42
CFAP43Q8NDM7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
CFAP43Q8NDM7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CFAP43Q8NDM7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CFAP43Q8NDM7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC30.18■■■□□ 2.42
CFAP43Q8NDM7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CFAP43Q8NDM7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CFAP43Q8NDM7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CFAP43Q8NDM7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC30.18■■■□□ 2.42
CFAP43Q8NDM7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CFAP43Q8NDM7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC30.18■■■□□ 2.42
CFAP43Q8NDM7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CFAP43Q8NDM7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CFAP43Q8NDM7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC30.18■■■□□ 2.42
CFAP43Q8NDM7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 AC004870.1-201ENST00000315132 882 ntBASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
CFAP43Q8NDM7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
CFAP43Q8NDM7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC30.16■■■□□ 2.42
CFAP43Q8NDM7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CFAP43Q8NDM7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC30.16■■■□□ 2.42
CFAP43Q8NDM7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CFAP43Q8NDM7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC30.16■■■□□ 2.42
CFAP43Q8NDM7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
CFAP43Q8NDM7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CFAP43Q8NDM7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC30.15■■■□□ 2.42
CFAP43Q8NDM7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CFAP43Q8NDM7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CFAP43Q8NDM7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC30.15■■■□□ 2.42
CFAP43Q8NDM7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CFAP43Q8NDM7 LINC01006-201ENST00000333319 2292 ntBASIC30.15■■■□□ 2.42
CFAP43Q8NDM7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC30.15■■■□□ 2.42
CFAP43Q8NDM7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
CFAP43Q8NDM7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms