Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00311Q8N616 Z85996.1-201ENST00000494644 937 ntBASIC15.63■□□□□ 0.09
LINC00311Q8N616 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.63■□□□□ 0.09
LINC00311Q8N616 AC142381.4-202ENST00000563973 229 ntBASIC15.63■□□□□ 0.09
LINC00311Q8N616 AC073195.1-201ENST00000607241 877 ntBASIC15.63■□□□□ 0.09
LINC00311Q8N616 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC00311Q8N616 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
LINC00311Q8N616 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC00311Q8N616 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC00311Q8N616 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC00311Q8N616 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00311Q8N616 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00311Q8N616 KRT8P41-201ENST00000533985 1514 ntBASIC15.63■□□□□ 0.09
LINC00311Q8N616 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00311Q8N616 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00311Q8N616 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00311Q8N616 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 AC004980.1-204ENST00000429707 299 ntBASIC15.62■□□□□ 0.09
LINC00311Q8N616 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 AC026271.3-201ENST00000571884 352 ntBASIC15.62■□□□□ 0.09
LINC00311Q8N616 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 AF186192.3-201ENST00000583427 947 ntBASIC15.62■□□□□ 0.09
LINC00311Q8N616 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 FEM1AP3-201ENST00000403722 1741 ntBASIC15.62■□□□□ 0.09
LINC00311Q8N616 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00311Q8N616 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LINC00311Q8N616 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 KRT16P1-201ENST00000399124 1418 ntBASIC15.61■□□□□ 0.09
LINC00311Q8N616 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 AL161938.1-201ENST00000569833 2180 ntBASIC15.61■□□□□ 0.09
LINC00311Q8N616 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 GCSHP5-201ENST00000443090 522 ntBASIC15.61■□□□□ 0.09
LINC00311Q8N616 UBE2SP1-201ENST00000450587 669 ntBASIC15.61■□□□□ 0.09
LINC00311Q8N616 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC00311Q8N616 IRX1P1-201ENST00000438849 1838 ntBASIC15.61■□□□□ 0.09
LINC00311Q8N616 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.61■□□□□ 0.09
LINC00311Q8N616 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00311Q8N616 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00311Q8N616 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00311Q8N616 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00311Q8N616 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00311Q8N616 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00311Q8N616 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00311Q8N616 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms