Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 TMPOP1-202ENST00000424642 1267 ntBASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 RN7SL850P-201ENST00000579959 291 ntBASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 AP000525.1-201ENST00000608286 694 ntBASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 REXO1L10P-201ENST00000615707 1290 ntBASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 MIR6786-201ENST00000616843 113 ntBASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 AC079598.2-202ENST00000546624 1451 ntBASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 CR392000.1-201ENST00000624770 1228 ntBASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC33Q8N5R6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 AIRN-201ENST00000601203 4374 ntBASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 MIR1238-201ENST00000408483 83 ntBASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 AC087289.5-201ENST00000586076 3175 ntBASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC33Q8N5R6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC33Q8N5R6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC33Q8N5R6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC33Q8N5R6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC33Q8N5R6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC33Q8N5R6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC33Q8N5R6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC33Q8N5R6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CCDC33Q8N5R6 UNC93B2-201ENST00000285383 730 ntBASIC20.16■□□□□ 0.82
CCDC33Q8N5R6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC33Q8N5R6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms