Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCML4Q8N228 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCML4Q8N228 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCML4Q8N228 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCML4Q8N228 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.06■□□□□ 0.8
SCML4Q8N228 AC093484.2-201ENST00000580996 2166 ntBASIC20.06■□□□□ 0.8
SCML4Q8N228 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.06■□□□□ 0.8
SCML4Q8N228 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
SCML4Q8N228 TEX21P-204ENST00000641479 1693 ntBASIC20.06■□□□□ 0.8
SCML4Q8N228 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCML4Q8N228 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCML4Q8N228 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.06■□□□□ 0.8
SCML4Q8N228 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SCML4Q8N228 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SCML4Q8N228 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SCML4Q8N228 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SCML4Q8N228 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCML4Q8N228 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SCML4Q8N228 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCML4Q8N228 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCML4Q8N228 CA15P1-201ENST00000481698 905 ntBASIC20.05■□□□□ 0.8
SCML4Q8N228 SLC25A1P4-201ENST00000567977 778 ntBASIC20.05■□□□□ 0.8
SCML4Q8N228 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.05■□□□□ 0.8
SCML4Q8N228 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCML4Q8N228 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCML4Q8N228 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.05■□□□□ 0.8
SCML4Q8N228 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.05■□□□□ 0.8
SCML4Q8N228 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCML4Q8N228 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCML4Q8N228 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCML4Q8N228 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCML4Q8N228 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.05■□□□□ 0.8
SCML4Q8N228 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SCML4Q8N228 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.04■□□□□ 0.8
SCML4Q8N228 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SCML4Q8N228 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.04■□□□□ 0.8
SCML4Q8N228 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
SCML4Q8N228 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.04■□□□□ 0.8
SCML4Q8N228 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.04■□□□□ 0.8
SCML4Q8N228 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.04■□□□□ 0.8
SCML4Q8N228 MIR1238-201ENST00000408483 83 ntBASIC20.04■□□□□ 0.8
SCML4Q8N228 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.04■□□□□ 0.8
SCML4Q8N228 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.04■□□□□ 0.8
SCML4Q8N228 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
SCML4Q8N228 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SCML4Q8N228 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SCML4Q8N228 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.04■□□□□ 0.8
SCML4Q8N228 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.04■□□□□ 0.8
SCML4Q8N228 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.04■□□□□ 0.8
SCML4Q8N228 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 AC141586.3-201ENST00000562166 1838 ntBASIC20.04■□□□□ 0.8
SCML4Q8N228 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SCML4Q8N228 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCML4Q8N228 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.04■□□□□ 0.8
SCML4Q8N228 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.03■□□□□ 0.8
SCML4Q8N228 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.03■□□□□ 0.8
SCML4Q8N228 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCML4Q8N228 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.03■□□□□ 0.8
SCML4Q8N228 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.03■□□□□ 0.8
SCML4Q8N228 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
SCML4Q8N228 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.03■□□□□ 0.8
SCML4Q8N228 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.03■□□□□ 0.8
SCML4Q8N228 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SCML4Q8N228 CRYGFP-201ENST00000418459 633 ntBASIC20.03■□□□□ 0.8
SCML4Q8N228 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCML4Q8N228 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SCML4Q8N228 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.03■□□□□ 0.8
SCML4Q8N228 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.03■□□□□ 0.8
SCML4Q8N228 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.03■□□□□ 0.8
SCML4Q8N228 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SCML4Q8N228 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SCML4Q8N228 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.03■□□□□ 0.8
SCML4Q8N228 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.03■□□□□ 0.8
SCML4Q8N228 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SCML4Q8N228 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCML4Q8N228 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCML4Q8N228 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCML4Q8N228 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCML4Q8N228 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.02■□□□□ 0.8
SCML4Q8N228 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCML4Q8N228 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCML4Q8N228 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCML4Q8N228 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCML4Q8N228 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCML4Q8N228 AC087499.1-201ENST00000418141 1075 ntBASIC20.02■□□□□ 0.8
SCML4Q8N228 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.02■□□□□ 0.8
SCML4Q8N228 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.02■□□□□ 0.8
SCML4Q8N228 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms