Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 AL662844.1-201ENST00000546340 181 ntBASIC13.42□□□□□ -0.26
CSMD3Q7Z407 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 AC092329.2-201ENST00000598402 547 ntBASIC13.42□□□□□ -0.26
CSMD3Q7Z407 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 AC006128.1-201ENST00000624704 1661 ntBASIC13.42□□□□□ -0.26
CSMD3Q7Z407 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 AL162741.1-201ENST00000565563 1558 ntBASIC13.41□□□□□ -0.26
CSMD3Q7Z407 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 LINC00167-201ENST00000530583 1419 ntBASIC13.41□□□□□ -0.26
CSMD3Q7Z407 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 TSPY19P-201ENST00000418461 509 ntBASIC13.41□□□□□ -0.26
CSMD3Q7Z407 TSPY18P-201ENST00000441642 509 ntBASIC13.41□□□□□ -0.26
CSMD3Q7Z407 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CSMD3Q7Z407 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 AC079781.3-201ENST00000449110 356 ntBASIC13.4□□□□□ -0.26
CSMD3Q7Z407 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 MRPL3P1-201ENST00000400109 1033 ntBASIC13.4□□□□□ -0.26
CSMD3Q7Z407 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 TPSP2-201ENST00000561760 610 ntBASIC13.4□□□□□ -0.26
CSMD3Q7Z407 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 AC036111.1-201ENST00000533973 1582 ntBASIC13.4□□□□□ -0.26
CSMD3Q7Z407 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 CHCHD2P8-201ENST00000429873 447 ntBASIC13.4□□□□□ -0.26
CSMD3Q7Z407 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD3Q7Z407 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.4□□□□□ -0.27
CSMD3Q7Z407 IL9RP2-201ENST00000423948 1312 ntBASIC13.4□□□□□ -0.27
CSMD3Q7Z407 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.4□□□□□ -0.27
CSMD3Q7Z407 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms