Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD3Q7Z3D4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 KRT16P1-201ENST00000399124 1418 ntBASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 SDHAP1-207ENST00000440850 2000 ntBASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 CD177P1-201ENST00000606252 935 ntBASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 AP001412.1-201ENST00000608405 714 ntBASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.36■□□□□ 0.69
LYSMD3Q7Z3D4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 AL160286.2-201ENST00000567150 934 ntBASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 AC116562.4-201ENST00000641316 2276 ntBASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD3Q7Z3D4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 AC004980.1-204ENST00000429707 299 ntBASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.34■□□□□ 0.69
LYSMD3Q7Z3D4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
LYSMD3Q7Z3D4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.33■□□□□ 0.69
LYSMD3Q7Z3D4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.33■□□□□ 0.69
LYSMD3Q7Z3D4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LYSMD3Q7Z3D4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LYSMD3Q7Z3D4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LYSMD3Q7Z3D4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LYSMD3Q7Z3D4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
LYSMD3Q7Z3D4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 AC131212.4-201ENST00000623606 975 ntBASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms