Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 POU5F1P3-201ENST00000428824 1078 ntBASIC17.52■□□□□ 0.4
NIPAL3Q6P499 FAM201B-201ENST00000458407 597 ntBASIC17.52■□□□□ 0.4
NIPAL3Q6P499 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NIPAL3Q6P499 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.52■□□□□ 0.39
NIPAL3Q6P499 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
NIPAL3Q6P499 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NIPAL3Q6P499 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NIPAL3Q6P499 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NIPAL3Q6P499 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NIPAL3Q6P499 NEFHP1-201ENST00000412845 2629 ntBASIC17.51■□□□□ 0.39
NIPAL3Q6P499 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 CROCCP3-202ENST00000420820 1947 ntBASIC17.51■□□□□ 0.39
NIPAL3Q6P499 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 TSPY20P-201ENST00000450910 630 ntBASIC17.51■□□□□ 0.39
NIPAL3Q6P499 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 TFP1-202ENST00000475455 1573 ntBASIC17.51■□□□□ 0.39
NIPAL3Q6P499 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 AL161938.1-201ENST00000569833 2180 ntBASIC17.51■□□□□ 0.39
NIPAL3Q6P499 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 AC006058.3-201ENST00000606217 1069 ntBASIC17.51■□□□□ 0.39
NIPAL3Q6P499 AL121829.2-201ENST00000620908 328 ntBASIC17.51■□□□□ 0.39
NIPAL3Q6P499 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NIPAL3Q6P499 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 PRKY-204ENST00000533551 1019 ntBASIC17.5■□□□□ 0.39
NIPAL3Q6P499 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 AC069544.1-201ENST00000609399 999 ntBASIC17.5■□□□□ 0.39
NIPAL3Q6P499 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.5■□□□□ 0.39
NIPAL3Q6P499 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 272.9 ms