Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 TSPY12P-201ENST00000421279 868 ntBASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PTCRAQ6ISU1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 MIR1233-2-201ENST00000408138 82 ntBASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 MIR1233-1-201ENST00000408722 82 ntBASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 AC092865.5-201ENST00000545435 363 ntBASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 AC138894.3-201ENST00000603787 634 ntBASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 AL353801.3-201ENST00000609898 542 ntBASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.87■□□□□ 0.77
PTCRAQ6ISU1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 AC104819.1-201ENST00000504587 486 ntBASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCRAQ6ISU1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 AC079602.3-201ENST00000623931 403 ntBASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PTCRAQ6ISU1 AC092720.2-201ENST00000602388 1665 ntBASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 FAM220CP-201ENST00000395253 831 ntBASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 HLA-F-220ENST00000434407 884 ntBASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PTCRAQ6ISU1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTCRAQ6ISU1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCRAQ6ISU1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms