Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 SPDYE13P-201ENST00000445314 798 ntBASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 PRELID1P1-202ENST00000567272 903 ntBASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 MIR3652-201ENST00000579335 131 ntBASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 CR769767.2-201ENST00000622735 460 ntBASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 NPAP1P7-201ENST00000613027 823 ntBASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD4Q5XG99 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 AC009237.14-201ENST00000609975 1594 ntBASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 RASA4DP-201ENST00000460726 1199 ntBASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD4Q5XG99 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
LYSMD4Q5XG99 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.89■□□□□ 0.62
LYSMD4Q5XG99 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 AC092329.2-201ENST00000598402 547 ntBASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD4Q5XG99 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 AC020907.5-201ENST00000624372 1936 ntBASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms