Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
VPS13DQ5THJ4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13DQ5THJ4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 AC079602.3-201ENST00000623931 403 ntBASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 AC009237.14-201ENST00000609975 1594 ntBASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 AL391422.3-201ENST00000603791 2761 ntBASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 AC023511.2-201ENST00000618803 211 ntBASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 GPAT2P1-201ENST00000444924 1672 ntBASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13DQ5THJ4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13DQ5THJ4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 IFNL4P1-201ENST00000607083 540 ntBASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 AL157888.1-201ENST00000631930 593 ntBASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS13DQ5THJ4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms