Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL13A1Q5TAT6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 Z83851.2-201ENST00000609564 659 ntBASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.76■■□□□ 1.07
COL13A1Q5TAT6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL13A1Q5TAT6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
COL13A1Q5TAT6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.75■■□□□ 1.07
COL13A1Q5TAT6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL13A1Q5TAT6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.75■■□□□ 1.07
COL13A1Q5TAT6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.75■■□□□ 1.07
COL13A1Q5TAT6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.75■■□□□ 1.07
COL13A1Q5TAT6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.75■■□□□ 1.07
COL13A1Q5TAT6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.75■■□□□ 1.07
COL13A1Q5TAT6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL13A1Q5TAT6 AC093323.1-202ENST00000635031 2045 ntBASIC21.75■■□□□ 1.07
COL13A1Q5TAT6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 AC254562.1-201ENST00000417586 456 ntBASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 RNA5SP416-201ENST00000516838 111 ntBASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 AL591684.3-201ENST00000605187 298 ntBASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL13A1Q5TAT6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 MEIS3P1-201ENST00000495167 958 ntBASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 AP005901.3-202ENST00000581653 237 ntBASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL13A1Q5TAT6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL13A1Q5TAT6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms