Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ALFQ53S48 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.82■□□□□ 0.76
ALFQ53S48 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.82■□□□□ 0.76
ALFQ53S48 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 RBM17P1-201ENST00000453646 1190 ntBASIC19.82■□□□□ 0.76
ALFQ53S48 AC091390.4-202ENST00000476426 537 ntBASIC19.82■□□□□ 0.76
ALFQ53S48 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.82■□□□□ 0.76
ALFQ53S48 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.82■□□□□ 0.76
ALFQ53S48 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.82■□□□□ 0.76
ALFQ53S48 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ALFQ53S48 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.82■□□□□ 0.76
ALFQ53S48 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ALFQ53S48 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.82■□□□□ 0.76
ALFQ53S48 AC011298.2-201ENST00000617989 482 ntBASIC19.82■□□□□ 0.76
ALFQ53S48 AC130371.2-201ENST00000619443 611 ntBASIC19.82■□□□□ 0.76
ALFQ53S48 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.82■□□□□ 0.76
ALFQ53S48 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.82■□□□□ 0.76
ALFQ53S48 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ALFQ53S48 AC007952.6-201ENST00000573168 2673 ntBASIC19.82■□□□□ 0.76
ALFQ53S48 AC003957.1-201ENST00000625108 2673 ntBASIC19.82■□□□□ 0.76
ALFQ53S48 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
ALFQ53S48 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALFQ53S48 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ALFQ53S48 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALFQ53S48 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALFQ53S48 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ALFQ53S48 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.81■□□□□ 0.76
ALFQ53S48 AC079598.2-202ENST00000546624 1451 ntBASIC19.81■□□□□ 0.76
ALFQ53S48 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.81■□□□□ 0.76
ALFQ53S48 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALFQ53S48 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.81■□□□□ 0.76
ALFQ53S48 AC004951.3-201ENST00000418645 1148 ntBASIC19.81■□□□□ 0.76
ALFQ53S48 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.81■□□□□ 0.76
ALFQ53S48 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.81■□□□□ 0.76
ALFQ53S48 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALFQ53S48 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ALFQ53S48 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ALFQ53S48 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALFQ53S48 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALFQ53S48 AC093484.2-201ENST00000580996 2166 ntBASIC19.81■□□□□ 0.76
ALFQ53S48 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALFQ53S48 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALFQ53S48 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALFQ53S48 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.8■□□□□ 0.76
ALFQ53S48 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ALFQ53S48 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ALFQ53S48 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALFQ53S48 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.8■□□□□ 0.76
ALFQ53S48 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.8■□□□□ 0.76
ALFQ53S48 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALFQ53S48 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALFQ53S48 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.8■□□□□ 0.76
ALFQ53S48 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.8■□□□□ 0.76
ALFQ53S48 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.8■□□□□ 0.76
ALFQ53S48 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALFQ53S48 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.8■□□□□ 0.76
ALFQ53S48 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.8■□□□□ 0.76
ALFQ53S48 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALFQ53S48 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.8■□□□□ 0.76
ALFQ53S48 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ALFQ53S48 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
ALFQ53S48 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALFQ53S48 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALFQ53S48 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.8■□□□□ 0.76
ALFQ53S48 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALFQ53S48 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALFQ53S48 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ALFQ53S48 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.79■□□□□ 0.76
ALFQ53S48 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
ALFQ53S48 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 AP000525.1-201ENST00000608286 694 ntBASIC19.79■□□□□ 0.76
ALFQ53S48 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ALFQ53S48 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALFQ53S48 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.78■□□□□ 0.76
ALFQ53S48 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.78■□□□□ 0.76
ALFQ53S48 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms