Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 BX276092.2-201ENST00000417668 665 ntBASIC18.49■□□□□ 0.55
PDCD4Q53EL6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 AL162430.1-201ENST00000480705 870 ntBASIC18.49■□□□□ 0.55
PDCD4Q53EL6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.49■□□□□ 0.55
PDCD4Q53EL6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 Z98044.1-201ENST00000632503 1764 ntBASIC18.48■□□□□ 0.55
PDCD4Q53EL6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 AF201337.1-201ENST00000520239 748 ntBASIC18.48■□□□□ 0.55
PDCD4Q53EL6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 AC105036.2-201ENST00000569468 176 ntBASIC18.48■□□□□ 0.55
PDCD4Q53EL6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 FP475955.4-201ENST00000623131 1990 ntBASIC18.48■□□□□ 0.55
PDCD4Q53EL6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDCD4Q53EL6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 KRT8P8-201ENST00000434750 1448 ntBASIC18.47■□□□□ 0.55
PDCD4Q53EL6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDCD4Q53EL6 AIRN-201ENST00000601203 4374 ntBASIC18.46■□□□□ 0.55
PDCD4Q53EL6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 IRX1P1-201ENST00000438849 1838 ntBASIC18.46■□□□□ 0.55
PDCD4Q53EL6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 YBX1P10-201ENST00000444752 975 ntBASIC18.46■□□□□ 0.55
PDCD4Q53EL6 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.46■□□□□ 0.55
PDCD4Q53EL6 AL050303.2-201ENST00000619798 666 ntBASIC18.46■□□□□ 0.55
PDCD4Q53EL6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms