Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 PRKY-204ENST00000533551 1019 ntBASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 AP001271.2-201ENST00000624018 1556 ntBASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 NBPF21P-201ENST00000425093 1451 ntBASIC19.48■□□□□ 0.71
KHDC1Q4VXA5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 AC009237.14-201ENST00000609975 1594 ntBASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 Z82202.1-201ENST00000623446 1880 ntBASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KHDC1Q4VXA5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 FAM197Y4-202ENST00000622692 608 ntBASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KHDC1Q4VXA5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms