Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDKL1Q00532 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.95■□□□□ 0.62
CDKL1Q00532 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDKL1Q00532 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CDKL1Q00532 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CDKL1Q00532 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL1Q00532 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL1Q00532 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDKL1Q00532 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL1Q00532 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL1Q00532 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.94■□□□□ 0.62
CDKL1Q00532 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.94■□□□□ 0.62
CDKL1Q00532 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.94■□□□□ 0.62
CDKL1Q00532 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.94■□□□□ 0.62
CDKL1Q00532 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDKL1Q00532 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.94■□□□□ 0.62
CDKL1Q00532 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDKL1Q00532 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL1Q00532 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL1Q00532 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL1Q00532 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL1Q00532 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDKL1Q00532 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CDKL1Q00532 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL1Q00532 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL1Q00532 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL1Q00532 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL1Q00532 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CDKL1Q00532 AC069544.1-201ENST00000609399 999 ntBASIC18.93■□□□□ 0.62
CDKL1Q00532 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDKL1Q00532 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDKL1Q00532 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.93■□□□□ 0.62
CDKL1Q00532 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL1Q00532 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.93■□□□□ 0.62
CDKL1Q00532 AC005332.8-201ENST00000622750 2735 ntBASIC18.93■□□□□ 0.62
CDKL1Q00532 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL1Q00532 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL1Q00532 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL1Q00532 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.92■□□□□ 0.62
CDKL1Q00532 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CDKL1Q00532 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL1Q00532 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL1Q00532 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL1Q00532 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL1Q00532 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CDKL1Q00532 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL1Q00532 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL1Q00532 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL1Q00532 MTDHP1-201ENST00000605323 784 ntBASIC18.92■□□□□ 0.62
CDKL1Q00532 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.92■□□□□ 0.62
CDKL1Q00532 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
CDKL1Q00532 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL1Q00532 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL1Q00532 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL1Q00532 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL1Q00532 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDKL1Q00532 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL1Q00532 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDKL1Q00532 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CDKL1Q00532 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL1Q00532 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CDKL1Q00532 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDKL1Q00532 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDKL1Q00532 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDKL1Q00532 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL1Q00532 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL1Q00532 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CDKL1Q00532 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.91■□□□□ 0.62
CDKL1Q00532 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.91■□□□□ 0.62
CDKL1Q00532 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms