Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CX3CL1P78423 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
CX3CL1P78423 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.52■□□□□ 0.07
CX3CL1P78423 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CX3CL1P78423 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CL1P78423 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CX3CL1P78423 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CL1P78423 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CL1P78423 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CL1P78423 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CL1P78423 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CL1P78423 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CL1P78423 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
CX3CL1P78423 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.52■□□□□ 0.07
CX3CL1P78423 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CL1P78423 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
CX3CL1P78423 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CX3CL1P78423 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.51■□□□□ 0.07
CX3CL1P78423 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CX3CL1P78423 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.51■□□□□ 0.07
CX3CL1P78423 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.51■□□□□ 0.07
CX3CL1P78423 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CX3CL1P78423 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.51■□□□□ 0.07
CX3CL1P78423 AC128676.1-201ENST00000454392 318 ntBASIC15.51■□□□□ 0.07
CX3CL1P78423 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.51■□□□□ 0.07
CX3CL1P78423 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.51■□□□□ 0.07
CX3CL1P78423 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.51■□□□□ 0.07
CX3CL1P78423 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.51■□□□□ 0.07
CX3CL1P78423 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CX3CL1P78423 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.51■□□□□ 0.07
CX3CL1P78423 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CX3CL1P78423 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CX3CL1P78423 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.51■□□□□ 0.07
CX3CL1P78423 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CX3CL1P78423 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CL1P78423 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CX3CL1P78423 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.5■□□□□ 0.07
CX3CL1P78423 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.5■□□□□ 0.07
CX3CL1P78423 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CX3CL1P78423 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.5■□□□□ 0.07
CX3CL1P78423 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.5■□□□□ 0.07
CX3CL1P78423 RN7SL471P-201ENST00000580476 299 ntBASIC15.5■□□□□ 0.07
CX3CL1P78423 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.5■□□□□ 0.07
CX3CL1P78423 AL023875.1-201ENST00000640777 796 ntBASIC15.5■□□□□ 0.07
CX3CL1P78423 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.5■□□□□ 0.07
CX3CL1P78423 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 NBPF21P-201ENST00000425093 1451 ntBASIC15.5■□□□□ 0.07
CX3CL1P78423 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.5■□□□□ 0.07
CX3CL1P78423 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CX3CL1P78423 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CX3CL1P78423 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.49■□□□□ 0.07
CX3CL1P78423 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CX3CL1P78423 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CX3CL1P78423 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CX3CL1P78423 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.49■□□□□ 0.07
CX3CL1P78423 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.49■□□□□ 0.07
CX3CL1P78423 KRT18P16-201ENST00000510337 1294 ntBASIC15.49■□□□□ 0.07
CX3CL1P78423 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.49■□□□□ 0.07
CX3CL1P78423 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms