Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.63□□□□□ -0.23
RPL39P62891 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RPL39P62891 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.63□□□□□ -0.23
RPL39P62891 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.63□□□□□ -0.23
RPL39P62891 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RPL39P62891 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.62□□□□□ -0.23
RPL39P62891 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RPL39P62891 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RPL39P62891 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.62□□□□□ -0.23
RPL39P62891 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.62□□□□□ -0.23
RPL39P62891 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.62□□□□□ -0.23
RPL39P62891 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.62□□□□□ -0.23
RPL39P62891 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RPL39P62891 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.62□□□□□ -0.23
RPL39P62891 AC123595.1-201ENST00000440769 1046 ntBASIC13.62□□□□□ -0.23
RPL39P62891 TERF1P5-201ENST00000477545 1207 ntBASIC13.62□□□□□ -0.23
RPL39P62891 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.62□□□□□ -0.23
RPL39P62891 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.62□□□□□ -0.23
RPL39P62891 KRT18P14-201ENST00000534205 1250 ntBASIC13.62□□□□□ -0.23
RPL39P62891 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.62□□□□□ -0.23
RPL39P62891 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.62□□□□□ -0.23
RPL39P62891 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.62□□□□□ -0.23
RPL39P62891 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
RPL39P62891 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.62□□□□□ -0.23
RPL39P62891 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RPL39P62891 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL39P62891 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RPL39P62891 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RPL39P62891 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RPL39P62891 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RPL39P62891 Z98044.1-201ENST00000632503 1764 ntBASIC13.61□□□□□ -0.23
RPL39P62891 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.61□□□□□ -0.23
RPL39P62891 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.61□□□□□ -0.23
RPL39P62891 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RPL39P62891 MCRIP2P1-201ENST00000394346 511 ntBASIC13.61□□□□□ -0.23
RPL39P62891 KRT19P1-201ENST00000405746 1186 ntBASIC13.61□□□□□ -0.23
RPL39P62891 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL39P62891 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.61□□□□□ -0.23
RPL39P62891 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL39P62891 MFSD11-216ENST00000590393 1141 ntBASIC13.61□□□□□ -0.23
RPL39P62891 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 BICD1-207ENST00000551848 1962 ntBASIC13.61□□□□□ -0.23
RPL39P62891 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL39P62891 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL39P62891 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RPL39P62891 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL39P62891 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL39P62891 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.61□□□□□ -0.23
RPL39P62891 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RPL39P62891 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL39P62891 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL39P62891 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL39P62891 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL39P62891 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.6□□□□□ -0.23
RPL39P62891 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RPL39P62891 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms