Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 FAM207BP-201ENST00000447172 505 ntBASIC19.42■□□□□ 0.7
AP1S1P61966 RBM17P1-201ENST00000453646 1190 ntBASIC19.42■□□□□ 0.7
AP1S1P61966 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.42■□□□□ 0.7
AP1S1P61966 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S1P61966 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.42■□□□□ 0.7
AP1S1P61966 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.42■□□□□ 0.7
AP1S1P61966 AL355075.4-201ENST00000554988 638 ntBASIC19.42■□□□□ 0.7
AP1S1P61966 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.42■□□□□ 0.7
AP1S1P61966 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.42■□□□□ 0.7
AP1S1P61966 AP000692.2-201ENST00000608391 879 ntBASIC19.42■□□□□ 0.7
AP1S1P61966 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
AP1S1P61966 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S1P61966 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S1P61966 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.42■□□□□ 0.7
AP1S1P61966 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
AP1S1P61966 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S1P61966 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
AP1S1P61966 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.41■□□□□ 0.7
AP1S1P61966 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.41■□□□□ 0.7
AP1S1P61966 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.41■□□□□ 0.7
AP1S1P61966 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.41■□□□□ 0.7
AP1S1P61966 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
AP1S1P61966 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S1P61966 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S1P61966 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S1P61966 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
AP1S1P61966 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
AP1S1P61966 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
AP1S1P61966 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.41■□□□□ 0.7
AP1S1P61966 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
AP1S1P61966 TSPY21P-201ENST00000433481 731 ntBASIC19.41■□□□□ 0.7
AP1S1P61966 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.41■□□□□ 0.7
AP1S1P61966 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.41■□□□□ 0.7
AP1S1P61966 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.41■□□□□ 0.7
AP1S1P61966 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
AP1S1P61966 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S1P61966 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
AP1S1P61966 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.41■□□□□ 0.7
AP1S1P61966 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S1P61966 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S1P61966 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.4■□□□□ 0.7
AP1S1P61966 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
AP1S1P61966 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.4■□□□□ 0.7
AP1S1P61966 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.4■□□□□ 0.7
AP1S1P61966 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
AP1S1P61966 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.4■□□□□ 0.7
AP1S1P61966 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
AP1S1P61966 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 AC008040.2-201ENST00000461049 708 ntBASIC19.4■□□□□ 0.7
AP1S1P61966 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.4■□□□□ 0.7
AP1S1P61966 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.4■□□□□ 0.7
AP1S1P61966 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.4■□□□□ 0.7
AP1S1P61966 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.4■□□□□ 0.7
AP1S1P61966 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
AP1S1P61966 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.4■□□□□ 0.7
AP1S1P61966 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.4■□□□□ 0.7
AP1S1P61966 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S1P61966 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP1S1P61966 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP1S1P61966 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP1S1P61966 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
AP1S1P61966 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S1P61966 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S1P61966 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
AP1S1P61966 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S1P61966 AC093484.2-201ENST00000580996 2166 ntBASIC19.39■□□□□ 0.69
AP1S1P61966 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.39■□□□□ 0.69
AP1S1P61966 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.39■□□□□ 0.69
AP1S1P61966 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
AP1S1P61966 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S1P61966 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
AP1S1P61966 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.39■□□□□ 0.69
AP1S1P61966 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.39■□□□□ 0.69
AP1S1P61966 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S1P61966 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S1P61966 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.39■□□□□ 0.69
AP1S1P61966 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.39■□□□□ 0.69
AP1S1P61966 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
AP1S1P61966 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
AP1S1P61966 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.39■□□□□ 0.69
AP1S1P61966 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S1P61966 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S1P61966 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
AP1S1P61966 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP1S1P61966 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms