Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SEC61A1P61619 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SEC61A1P61619 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.83■□□□□ 0.28
SEC61A1P61619 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.83■□□□□ 0.28
SEC61A1P61619 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SEC61A1P61619 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.83■□□□□ 0.28
SEC61A1P61619 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.83■□□□□ 0.28
SEC61A1P61619 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.83■□□□□ 0.28
SEC61A1P61619 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SEC61A1P61619 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.83■□□□□ 0.28
SEC61A1P61619 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.83■□□□□ 0.28
SEC61A1P61619 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SEC61A1P61619 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SEC61A1P61619 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC61A1P61619 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.82■□□□□ 0.28
SEC61A1P61619 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SEC61A1P61619 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.82■□□□□ 0.28
SEC61A1P61619 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SEC61A1P61619 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.82■□□□□ 0.28
SEC61A1P61619 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.82■□□□□ 0.28
SEC61A1P61619 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.82■□□□□ 0.28
SEC61A1P61619 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.82■□□□□ 0.28
SEC61A1P61619 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SEC61A1P61619 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 AC098590.1-201ENST00000468126 897 ntBASIC16.82■□□□□ 0.28
SEC61A1P61619 UNC93B4-201ENST00000505679 747 ntBASIC16.82■□□□□ 0.28
SEC61A1P61619 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.82■□□□□ 0.28
SEC61A1P61619 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.82■□□□□ 0.28
SEC61A1P61619 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SEC61A1P61619 AC073648.6-201ENST00000641589 218 ntBASIC16.82■□□□□ 0.28
SEC61A1P61619 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.82■□□□□ 0.28
SEC61A1P61619 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.82■□□□□ 0.28
SEC61A1P61619 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.82■□□□□ 0.28
SEC61A1P61619 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SEC61A1P61619 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC61A1P61619 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.82■□□□□ 0.28
SEC61A1P61619 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 TMEM179-206ENST00000616017 1645 ntBASIC16.81■□□□□ 0.28
SEC61A1P61619 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SEC61A1P61619 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SEC61A1P61619 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SEC61A1P61619 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SEC61A1P61619 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.81■□□□□ 0.28
SEC61A1P61619 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.81■□□□□ 0.28
SEC61A1P61619 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SEC61A1P61619 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.81■□□□□ 0.28
SEC61A1P61619 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61A1P61619 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SEC61A1P61619 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.8■□□□□ 0.28
SEC61A1P61619 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SEC61A1P61619 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms