Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH13P55290 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH13P55290 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.83■□□□□ 0.61
CDH13P55290 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.83■□□□□ 0.61
CDH13P55290 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.83■□□□□ 0.61
CDH13P55290 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH13P55290 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH13P55290 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH13P55290 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.83■□□□□ 0.6
CDH13P55290 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH13P55290 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.83■□□□□ 0.6
CDH13P55290 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
CDH13P55290 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH13P55290 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDH13P55290 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH13P55290 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDH13P55290 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH13P55290 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH13P55290 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH13P55290 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH13P55290 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH13P55290 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CDH13P55290 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH13P55290 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH13P55290 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH13P55290 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDH13P55290 SOX15-203ENST00000570788 1093 ntBASIC18.82■□□□□ 0.6
CDH13P55290 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH13P55290 AL109923.1-201ENST00000618799 583 ntBASIC18.82■□□□□ 0.6
CDH13P55290 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDH13P55290 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH13P55290 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH13P55290 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH13P55290 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDH13P55290 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH13P55290 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH13P55290 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH13P55290 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH13P55290 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDH13P55290 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH13P55290 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH13P55290 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH13P55290 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH13P55290 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH13P55290 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH13P55290 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CDH13P55290 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CDH13P55290 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.8■□□□□ 0.6
CDH13P55290 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH13P55290 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDH13P55290 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 AL138781.2-201ENST00000617896 1843 ntBASIC18.8■□□□□ 0.6
CDH13P55290 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDH13P55290 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH13P55290 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDH13P55290 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH13P55290 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH13P55290 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.8■□□□□ 0.6
CDH13P55290 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.8■□□□□ 0.6
CDH13P55290 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
CDH13P55290 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH13P55290 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH13P55290 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms