Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PMS2P54278 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.88■□□□□ 0.77
PMS2P54278 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.88■□□□□ 0.77
PMS2P54278 KRT18P68-201ENST00000392293 1000 ntBASIC19.88■□□□□ 0.77
PMS2P54278 AC073210.2-201ENST00000430369 194 ntBASIC19.88■□□□□ 0.77
PMS2P54278 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PMS2P54278 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PMS2P54278 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.88■□□□□ 0.77
PMS2P54278 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PMS2P54278 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.88■□□□□ 0.77
PMS2P54278 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 AC018470.1-201ENST00000624790 3129 ntBASIC19.87■□□□□ 0.77
PMS2P54278 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.87■□□□□ 0.77
PMS2P54278 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 AC023632.3-201ENST00000521633 145 ntBASIC19.87■□□□□ 0.77
PMS2P54278 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.87■□□□□ 0.77
PMS2P54278 AC105036.2-201ENST00000569468 176 ntBASIC19.87■□□□□ 0.77
PMS2P54278 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PMS2P54278 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.87■□□□□ 0.77
PMS2P54278 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PMS2P54278 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS2P54278 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PMS2P54278 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PMS2P54278 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PMS2P54278 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PMS2P54278 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PMS2P54278 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.86■□□□□ 0.77
PMS2P54278 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PMS2P54278 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.86■□□□□ 0.77
PMS2P54278 RARRES2P4-201ENST00000514074 484 ntBASIC19.86■□□□□ 0.77
PMS2P54278 AC013268.1-206ENST00000638368 961 ntBASIC19.86■□□□□ 0.77
PMS2P54278 AC112229.1-201ENST00000639295 961 ntBASIC19.86■□□□□ 0.77
PMS2P54278 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PMS2P54278 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.86■□□□□ 0.77
PMS2P54278 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
PMS2P54278 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.86■□□□□ 0.77
PMS2P54278 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PMS2P54278 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.86■□□□□ 0.77
PMS2P54278 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PMS2P54278 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PMS2P54278 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PMS2P54278 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.86■□□□□ 0.77
PMS2P54278 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PMS2P54278 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PMS2P54278 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PMS2P54278 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PMS2P54278 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PMS2P54278 Z98044.1-201ENST00000632503 1764 ntBASIC19.85■□□□□ 0.77
PMS2P54278 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.85■□□□□ 0.77
PMS2P54278 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PMS2P54278 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.85■□□□□ 0.77
PMS2P54278 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PMS2P54278 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PMS2P54278 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PMS2P54278 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PMS2P54278 FAM201B-201ENST00000458407 597 ntBASIC19.85■□□□□ 0.77
PMS2P54278 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.85■□□□□ 0.77
PMS2P54278 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.85■□□□□ 0.77
PMS2P54278 MIR4651-201ENST00000582622 73 ntBASIC19.85■□□□□ 0.77
PMS2P54278 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
PMS2P54278 AC093525.10-201ENST00000625130 1569 ntBASIC19.85■□□□□ 0.77
PMS2P54278 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PMS2P54278 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PMS2P54278 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PMS2P54278 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.85■□□□□ 0.77
PMS2P54278 AC018553.1-201ENST00000616682 1458 ntBASIC19.85■□□□□ 0.77
PMS2P54278 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
PMS2P54278 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PMS2P54278 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PMS2P54278 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PMS2P54278 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms