Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ITGA8P53708 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
ITGA8P53708 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ITGA8P53708 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ITGA8P53708 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ITGA8P53708 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
ITGA8P53708 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
ITGA8P53708 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ITGA8P53708 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.76■□□□□ 0.75
ITGA8P53708 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.76■□□□□ 0.75
ITGA8P53708 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.76■□□□□ 0.75
ITGA8P53708 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.76■□□□□ 0.75
ITGA8P53708 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.76■□□□□ 0.75
ITGA8P53708 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.76■□□□□ 0.75
ITGA8P53708 AF201337.1-201ENST00000520239 748 ntBASIC19.76■□□□□ 0.75
ITGA8P53708 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.76■□□□□ 0.75
ITGA8P53708 AL050303.2-201ENST00000619798 666 ntBASIC19.76■□□□□ 0.75
ITGA8P53708 AC006557.6-201ENST00000623071 864 ntBASIC19.76■□□□□ 0.75
ITGA8P53708 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.76■□□□□ 0.75
ITGA8P53708 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.76■□□□□ 0.75
ITGA8P53708 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA8P53708 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.75■□□□□ 0.75
ITGA8P53708 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ITGA8P53708 Z98044.1-201ENST00000632503 1764 ntBASIC19.75■□□□□ 0.75
ITGA8P53708 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.75■□□□□ 0.75
ITGA8P53708 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ITGA8P53708 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITGA8P53708 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.75■□□□□ 0.75
ITGA8P53708 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ITGA8P53708 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.75■□□□□ 0.75
ITGA8P53708 IRX1P1-201ENST00000438849 1838 ntBASIC19.75■□□□□ 0.75
ITGA8P53708 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
ITGA8P53708 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ITGA8P53708 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.75■□□□□ 0.75
ITGA8P53708 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.75■□□□□ 0.75
ITGA8P53708 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.75■□□□□ 0.75
ITGA8P53708 AC090192.1-201ENST00000517740 490 ntBASIC19.75■□□□□ 0.75
ITGA8P53708 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.75■□□□□ 0.75
ITGA8P53708 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.75■□□□□ 0.75
ITGA8P53708 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITGA8P53708 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITGA8P53708 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.75■□□□□ 0.75
ITGA8P53708 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITGA8P53708 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITGA8P53708 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITGA8P53708 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITGA8P53708 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ITGA8P53708 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.75■□□□□ 0.75
ITGA8P53708 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.74■□□□□ 0.75
ITGA8P53708 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
ITGA8P53708 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ITGA8P53708 AC026471.1-201ENST00000564629 3026 ntBASIC19.74■□□□□ 0.75
ITGA8P53708 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ITGA8P53708 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ITGA8P53708 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ITGA8P53708 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ITGA8P53708 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.74■□□□□ 0.75
ITGA8P53708 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.74■□□□□ 0.75
ITGA8P53708 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ITGA8P53708 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ITGA8P53708 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.74■□□□□ 0.75
ITGA8P53708 RPS2P52-201ENST00000469610 820 ntBASIC19.74■□□□□ 0.75
ITGA8P53708 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.74■□□□□ 0.75
ITGA8P53708 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.74■□□□□ 0.75
ITGA8P53708 AC090164.3-201ENST00000610780 2143 ntBASIC19.74■□□□□ 0.75
ITGA8P53708 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.74■□□□□ 0.75
ITGA8P53708 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ITGA8P53708 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ITGA8P53708 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.74■□□□□ 0.75
ITGA8P53708 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ITGA8P53708 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ITGA8P53708 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ITGA8P53708 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ITGA8P53708 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ITGA8P53708 AL512353.2-201ENST00000448759 1962 ntBASIC19.74■□□□□ 0.75
ITGA8P53708 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms