Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6CP51160 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6CP51160 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE6CP51160 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6CP51160 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6CP51160 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE6CP51160 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6CP51160 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6CP51160 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6CP51160 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6CP51160 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.8■□□□□ 0.92
PDE6CP51160 AL353807.1-201ENST00000427475 662 ntBASIC20.8■□□□□ 0.92
PDE6CP51160 KRT16P5-201ENST00000455284 522 ntBASIC20.8■□□□□ 0.92
PDE6CP51160 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6CP51160 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.8■□□□□ 0.92
PDE6CP51160 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.8■□□□□ 0.92
PDE6CP51160 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PDE6CP51160 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.8■□□□□ 0.92
PDE6CP51160 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.8■□□□□ 0.92
PDE6CP51160 AL049637.2-201ENST00000641778 930 ntBASIC20.8■□□□□ 0.92
PDE6CP51160 NBPF21P-201ENST00000425093 1451 ntBASIC20.8■□□□□ 0.92
PDE6CP51160 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE6CP51160 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PDE6CP51160 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6CP51160 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PDE6CP51160 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
PDE6CP51160 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PDE6CP51160 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PDE6CP51160 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PDE6CP51160 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE6CP51160 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.79■□□□□ 0.92
PDE6CP51160 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PDE6CP51160 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE6CP51160 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6CP51160 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PDE6CP51160 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.79■□□□□ 0.92
PDE6CP51160 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE6CP51160 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PDE6CP51160 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PDE6CP51160 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE6CP51160 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.78■□□□□ 0.92
PDE6CP51160 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.78■□□□□ 0.92
PDE6CP51160 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.78■□□□□ 0.92
PDE6CP51160 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.78■□□□□ 0.92
PDE6CP51160 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.78■□□□□ 0.92
PDE6CP51160 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PDE6CP51160 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PDE6CP51160 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 ZNF815P-204ENST00000434898 1737 ntBASIC20.78■□□□□ 0.92
PDE6CP51160 KRT8P8-201ENST00000434750 1448 ntBASIC20.78■□□□□ 0.92
PDE6CP51160 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.78■□□□□ 0.92
PDE6CP51160 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6CP51160 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PDE6CP51160 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6CP51160 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6CP51160 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6CP51160 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6CP51160 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.77■□□□□ 0.92
PDE6CP51160 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6CP51160 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6CP51160 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
PDE6CP51160 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6CP51160 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PDE6CP51160 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6CP51160 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.77■□□□□ 0.92
PDE6CP51160 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.77■□□□□ 0.92
PDE6CP51160 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6CP51160 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.77■□□□□ 0.92
PDE6CP51160 MIR4785-201ENST00000585005 73 ntBASIC20.77■□□□□ 0.92
PDE6CP51160 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PDE6CP51160 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6CP51160 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
PDE6CP51160 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.77■□□□□ 0.91
PDE6CP51160 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
PDE6CP51160 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PDE6CP51160 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms