Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
LHX2P50458 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LHX2P50458 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.23■□□□□ 0.35
LHX2P50458 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.23■□□□□ 0.35
LHX2P50458 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LHX2P50458 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LHX2P50458 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LHX2P50458 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LHX2P50458 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX2P50458 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX2P50458 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX2P50458 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LHX2P50458 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LHX2P50458 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LHX2P50458 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX2P50458 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.22■□□□□ 0.35
LHX2P50458 FAM210CP-201ENST00000445714 574 ntBASIC17.22■□□□□ 0.35
LHX2P50458 PRSS44-201ENST00000515154 1146 ntBASIC17.22■□□□□ 0.35
LHX2P50458 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.22■□□□□ 0.35
LHX2P50458 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
LHX2P50458 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LHX2P50458 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LHX2P50458 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX2P50458 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.22■□□□□ 0.35
LHX2P50458 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX2P50458 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LHX2P50458 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.22■□□□□ 0.35
LHX2P50458 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.22■□□□□ 0.35
LHX2P50458 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX2P50458 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LHX2P50458 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.22■□□□□ 0.35
LHX2P50458 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LHX2P50458 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LHX2P50458 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX2P50458 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LHX2P50458 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.21■□□□□ 0.35
LHX2P50458 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.21■□□□□ 0.35
LHX2P50458 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LHX2P50458 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LHX2P50458 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.21■□□□□ 0.35
LHX2P50458 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LHX2P50458 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.21■□□□□ 0.35
LHX2P50458 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.21■□□□□ 0.35
LHX2P50458 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX2P50458 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.21■□□□□ 0.35
LHX2P50458 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.21■□□□□ 0.35
LHX2P50458 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.21■□□□□ 0.35
LHX2P50458 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX2P50458 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.21■□□□□ 0.35
LHX2P50458 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.21■□□□□ 0.35
LHX2P50458 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.21■□□□□ 0.35
LHX2P50458 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.21■□□□□ 0.35
LHX2P50458 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX2P50458 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX2P50458 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.21■□□□□ 0.35
LHX2P50458 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX2P50458 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LHX2P50458 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.21■□□□□ 0.34
LHX2P50458 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LHX2P50458 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LHX2P50458 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX2P50458 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
LHX2P50458 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX2P50458 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX2P50458 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX2P50458 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.2■□□□□ 0.34
LHX2P50458 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LHX2P50458 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LHX2P50458 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX2P50458 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LHX2P50458 INGX-201ENST00000359239 846 ntBASIC17.2■□□□□ 0.34
LHX2P50458 RCN1P1-201ENST00000400413 996 ntBASIC17.2■□□□□ 0.34
LHX2P50458 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.2■□□□□ 0.34
LHX2P50458 SLC25A1P2-201ENST00000430693 912 ntBASIC17.2■□□□□ 0.34
LHX2P50458 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.2■□□□□ 0.34
LHX2P50458 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.2■□□□□ 0.34
LHX2P50458 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
LHX2P50458 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.2■□□□□ 0.34
LHX2P50458 AC005363.2-201ENST00000618631 242 ntBASIC17.2■□□□□ 0.34
LHX2P50458 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LHX2P50458 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LHX2P50458 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LHX2P50458 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LHX2P50458 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LHX2P50458 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LHX2P50458 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX2P50458 AFG3L1P-217ENST00000557444 2447 ntBASIC17.2■□□□□ 0.34
LHX2P50458 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX2P50458 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.2■□□□□ 0.34
LHX2P50458 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
LHX2P50458 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms