Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX2P48431 AC026471.1-201ENST00000564629 3026 ntBASIC16.96■□□□□ 0.31
SOX2P48431 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
SOX2P48431 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX2P48431 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SOX2P48431 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SOX2P48431 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.96■□□□□ 0.31
SOX2P48431 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SOX2P48431 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX2P48431 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX2P48431 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX2P48431 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX2P48431 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SOX2P48431 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX2P48431 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX2P48431 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX2P48431 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SOX2P48431 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SOX2P48431 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX2P48431 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.96■□□□□ 0.31
SOX2P48431 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX2P48431 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.96■□□□□ 0.3
SOX2P48431 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.96■□□□□ 0.3
SOX2P48431 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SOX2P48431 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SOX2P48431 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SOX2P48431 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.96■□□□□ 0.3
SOX2P48431 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SOX2P48431 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
SOX2P48431 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.96■□□□□ 0.3
SOX2P48431 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX2P48431 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX2P48431 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SOX2P48431 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SOX2P48431 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 AC007322.1-201ENST00000426983 750 ntBASIC16.95■□□□□ 0.3
SOX2P48431 AC093787.1-201ENST00000450396 207 ntBASIC16.95■□□□□ 0.3
SOX2P48431 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX2P48431 OR10C1-204ENST00000622521 1039 ntBASIC16.95■□□□□ 0.3
SOX2P48431 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SOX2P48431 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SOX2P48431 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX2P48431 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX2P48431 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX2P48431 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SOX2P48431 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX2P48431 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SOX2P48431 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX2P48431 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SOX2P48431 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX2P48431 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SOX2P48431 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX2P48431 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX2P48431 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX2P48431 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX2P48431 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX2P48431 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX2P48431 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX2P48431 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX2P48431 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SOX2P48431 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.94■□□□□ 0.3
SOX2P48431 BID-214ENST00000617586 542 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX2P48431 MIR6821-201ENST00000617625 74 ntBASIC16.94■□□□□ 0.3
SOX2P48431 AC231657.2-201ENST00000624556 255 ntBASIC16.94■□□□□ 0.3
SOX2P48431 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX2P48431 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX2P48431 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX2P48431 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX2P48431 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX2P48431 AC009113.1-201ENST00000570267 2443 ntBASIC16.94■□□□□ 0.3
SOX2P48431 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX2P48431 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX2P48431 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX2P48431 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.93■□□□□ 0.3
SOX2P48431 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SOX2P48431 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX2P48431 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX2P48431 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.93■□□□□ 0.3
SOX2P48431 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX2P48431 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SOX2P48431 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SOX2P48431 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.93■□□□□ 0.3
SOX2P48431 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX2P48431 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SOX2P48431 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SOX2P48431 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX2P48431 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX2P48431 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms