Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
PCK1P35558 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
PCK1P35558 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCK1P35558 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.27■□□□□ 0.83
PCK1P35558 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCK1P35558 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PCK1P35558 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCK1P35558 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCK1P35558 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.26■□□□□ 0.83
PCK1P35558 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCK1P35558 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCK1P35558 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCK1P35558 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCK1P35558 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCK1P35558 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCK1P35558 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCK1P35558 BX323043.1-201ENST00000641006 1765 ntBASIC20.26■□□□□ 0.83
PCK1P35558 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCK1P35558 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCK1P35558 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.25■□□□□ 0.83
PCK1P35558 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.25■□□□□ 0.83
PCK1P35558 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCK1P35558 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PCK1P35558 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PCK1P35558 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.25■□□□□ 0.83
PCK1P35558 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.25■□□□□ 0.83
PCK1P35558 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
PCK1P35558 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PCK1P35558 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PCK1P35558 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCK1P35558 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.25■□□□□ 0.83
PCK1P35558 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.25■□□□□ 0.83
PCK1P35558 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PCK1P35558 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCK1P35558 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCK1P35558 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 AC104417.2-201ENST00000562989 1793 ntBASIC20.24■□□□□ 0.83
PCK1P35558 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCK1P35558 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
PCK1P35558 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PCK1P35558 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.24■□□□□ 0.83
PCK1P35558 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.24■□□□□ 0.83
PCK1P35558 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PCK1P35558 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PCK1P35558 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PCK1P35558 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCK1P35558 NBPF21P-201ENST00000425093 1451 ntBASIC20.24■□□□□ 0.83
PCK1P35558 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.24■□□□□ 0.83
PCK1P35558 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.23■□□□□ 0.83
PCK1P35558 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCK1P35558 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCK1P35558 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCK1P35558 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCK1P35558 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.23■□□□□ 0.83
PCK1P35558 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCK1P35558 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCK1P35558 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCK1P35558 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCK1P35558 ESRRAP1-201ENST00000400596 1257 ntBASIC20.23■□□□□ 0.83
PCK1P35558 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCK1P35558 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.23■□□□□ 0.83
PCK1P35558 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.23■□□□□ 0.83
PCK1P35558 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.23■□□□□ 0.83
PCK1P35558 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.23■□□□□ 0.83
PCK1P35558 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.23■□□□□ 0.83
PCK1P35558 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCK1P35558 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.23■□□□□ 0.83
PCK1P35558 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
PCK1P35558 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.23■□□□□ 0.83
PCK1P35558 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.23■□□□□ 0.83
PCK1P35558 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.22■□□□□ 0.83
PCK1P35558 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCK1P35558 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PCK1P35558 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCK1P35558 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCK1P35558 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms